Molecular identification of Mycobacterium spp. isolated from Brazilian wild boars

Mol Biol Rep. 2021 Jan;48(1):1025-1031. doi: 10.1007/s11033-020-06118-7. Epub 2021 Jan 4.

Abstract

Wild boars (Sus scrofa) are susceptible to mycobacterial infections, including tuberculous and non-tuberculous mycobacteria. Recently, Mycobacterium spp. infections were described in Brazilian wild boars, which can act as bacterial reservoirs. Here, we aim to characterize 15 Mycobacterium spp. isolates from Brazilian wild boars' tissues through partial sequencing of the heat shock protein 65 (hsp65) gene and phylogenetic analysis. The isolates were classified as M. tuberculosis (33.3%), M. colombiense (33.3%), M. avium subsp. hominissuis (13.3%), M. parmense (13.3%) and M. mantenii (6.66%). The isolates classified as M. tuberculosis were confirmed as variant bovis by PCR. At phylogenetic analysis some isolates formed separated clades, indicating genetic variability. Different Mycobacterium species were recovered from wild boars circulating in Brazil, including mycobacteria associated to zoonotic infections, such as M. tuberculosis. In addition, this is the first report in Brazilian wild boars on M. mantenii and M. parmense detection, two recently described pathogenic mycobacteria. However, the isolates' genetic diversity-i.e. identities lower than 100% when compared to reference sequences-suggests that other genotyping tools would allow a deeper characterization. Nonetheless, the reported data contributes to the knowledge on mycobacterial infections in wild boars from Brazil.

Keywords: Genotyping; Mycobacterium avium complex; Mycobacterium mantenii; Mycobacterium parmense; Mycobacterium tuberculosis; Tuberculosis; Wild boars; hsp65 gene sequencing.

MeSH terms

  • Animals
  • Brazil / epidemiology
  • DNA, Bacterial / genetics
  • Disease Reservoirs / microbiology
  • Genetic Variation
  • Humans
  • Mycobacterium / classification
  • Mycobacterium / genetics*
  • Mycobacterium / isolation & purification
  • Mycobacterium tuberculosis / classification
  • Mycobacterium tuberculosis / genetics*
  • Mycobacterium tuberculosis / isolation & purification
  • Phylogeny
  • Sequence Analysis, DNA
  • Sus scrofa / microbiology
  • Swine
  • Swine Diseases / epidemiology*
  • Swine Diseases / microbiology
  • Tuberculosis / epidemiology
  • Tuberculosis / microbiology
  • Tuberculosis / veterinary*

Substances

  • DNA, Bacterial

Supplementary concepts

  • Mycobacterium avium subsp. hominissuis
  • Mycobacterium colombiense
  • Mycobacterium mantenii
  • Mycobacterium parmense