Blocking Effect of Demethylzeylasteral on the Interaction between Human ACE2 Protein and SARS-CoV-2 RBD Protein Discovered Using SPR Technology

Molecules. 2020 Dec 24;26(1):57. doi: 10.3390/molecules26010057.

Abstract

The novel coronavirus disease (2019-nCoV) has been affecting global health since the end of 2019, and there is no sign that the epidemic is abating. Targeting the interaction between the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike protein and the human angiotensin-converting enzyme 2 (ACE2) receptor is a promising therapeutic strategy. In this study, surface plasmon resonance (SPR) was used as the primary method to screen a library of 960 compounds. A compound 02B05 (demethylzeylasteral, CAS number: 107316-88-1) that had high affinities for S-RBD and ACE2 was discovered, and binding affinities (KD, μM) of 02B05-ACE2 and 02B05-S-RBD were 1.736 and 1.039 μM, respectively. The results of a competition experiment showed that 02B05 could effectively block the binding of S-RBD to ACE2 protein. Furthermore, pseudovirus infection assay revealed that 02B05 could inhibit entry of SARS-CoV-2 pseudovirus into 293T cells to a certain extent at nontoxic concentration. The compoundobtained in this study serve as references for the design of drugs which have potential in the treatment of COVID-19 and can thus accelerate the process of developing effective drugs to treat SARS-CoV-2 infections.

Keywords: ACE2; COVID-19; SARS-CoV-2; protein–protein interaction inhibitors; receptor binding domain; surface plasmon resonance.

MeSH terms

  • Angiotensin-Converting Enzyme 2 / metabolism*
  • HEK293 Cells
  • Humans
  • Protein Binding
  • Protein Interaction Domains and Motifs / drug effects*
  • SARS-CoV-2 / metabolism*
  • Surface Plasmon Resonance / methods*
  • Triterpenes / pharmacology*
  • Viral Proteins / metabolism*

Substances

  • Triterpenes
  • Viral Proteins
  • demethylzeylasteral
  • ACE2 protein, human
  • Angiotensin-Converting Enzyme 2