Regulation of autophagosome biogenesis by OFD1-mediated selective autophagy

EMBO J. 2021 Feb 15;40(4):e105120. doi: 10.15252/embj.2020105120. Epub 2020 Dec 28.

Abstract

Autophagy is a lysosome-dependent degradation pathway essential to maintain cellular homeostasis. Therefore, either defective or excessive autophagy may be detrimental for cells and tissues. The past decade was characterized by significant advances in molecular dissection of stimulatory autophagy inputs; however, our understanding of the mechanisms that restrain autophagy is far from complete. Here, we describe a negative feedback mechanism that limits autophagosome biogenesis based on the selective autophagy-mediated degradation of ATG13, a component of the ULK1 autophagy initiation complex. We demonstrate that the centrosomal protein OFD1 acts as bona fide autophagy receptor for ATG13 via direct interaction with the Atg8/LC3/GABARAP family of proteins. We also show that patients with Oral-Facial-Digital type I syndrome, caused by mutations in the OFD1 gene, display excessive autophagy and that genetic inhibition of autophagy in a mouse model of the disease, significantly ameliorates polycystic kidney, a clinical manifestation of the disorder. Collectively, our data report the discovery of an autophagy self-regulated mechanism and implicate dysregulated autophagy in the pathogenesis of renal cystic disease in mammals.

Keywords: OFD1; autophagy receptor; polycystic kidney; selective autophagy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis Regulatory Proteins / genetics
  • Apoptosis Regulatory Proteins / metabolism*
  • Autophagosomes / physiology*
  • Autophagy*
  • Autophagy-Related Protein 8 Family / genetics
  • Autophagy-Related Protein 8 Family / metabolism*
  • Humans
  • Lysosomes / metabolism
  • Lysosomes / pathology
  • Male
  • Mice
  • Mice, Inbred C57BL
  • Microtubule-Associated Proteins / genetics
  • Microtubule-Associated Proteins / metabolism*
  • Polycystic Kidney Diseases / etiology
  • Polycystic Kidney Diseases / metabolism
  • Polycystic Kidney Diseases / pathology*
  • Proteins / genetics
  • Proteins / metabolism*

Substances

  • Apoptosis Regulatory Proteins
  • Autophagy-Related Protein 8 Family
  • GABARAP protein, human
  • GABARAPL2 protein, human
  • MAP1LC3A protein, human
  • Microtubule-Associated Proteins
  • OFD1 protein, human
  • Proteins