Characterization of the complete chloroplast genome of the Pohlia nutans M211 from Antarctica

Qing Jin; Liping Zhang; Dan Li; Yingying He; Changfeng Qu; Jinlai Miao

doi:10.1080/23802359.2020.1721368

Characterization of the complete chloroplast genome of the Pohlia nutans M211 from Antarctica

Mitochondrial DNA B Resour. 2020 Feb 11;5(1):1096-1097. doi: 10.1080/23802359.2020.1721368.

Authors

Qing Jin^{1

2}, Liping Zhang¹, Dan Li¹, Yingying He², Changfeng Qu^{2

3}, Jinlai Miao^{1

2

3}

Affiliations

¹ College of Chemistry and Molecular Engineering, Qingdao University of Science and Technology, Qingdao, Shandong, China.
² Key Laboratory of Marine Bioactive Substances, First Institute of Oceanography, Ministry of Natural Resource, Qingdao, Shandong, China.
³ Laboratory for Marine Drugs and Bioproducts, Qingdao National Laboratory for Marine Science and Technology, Qingdao, Shandong, China.

Abstract

The Antarctic Pohlia nutans M211 complete chloroplast (cp) genome, sequenced using Illumina NovaSeq PE150, was 125,199 bp in length. It contained 19,836 bp of inverted repeat (IR) regions that separated a large single-copy region (LSC) of 86,738 bp and a small single-copy region (SSC) of 18,580 bp. The whole-genome encodes 132 genes (80 protein-coding genes, 36 tRNA genes, and 8 rRNA genes) and had 29.5% GC content. The M211 was congruent with Sanionia uncinata (KM111545.1) according to the Phylogenetic tree analyses.

Keywords: Pohlia nutans M211; chloroplast genome; phylogenetic tree.

Grants and funding

This work was supported by National Key Research and Development Program of China [2018YFD0900705], the China Ocean Mineral Resources Research and Development Association [DY135-B2-14], and Natural Science Foundation of Shandong Province [ZR2019BD023].