Methylation biomarkers with discriminating ability are potential therapeutic targets in lung adenocarcinoma

Epigenomics. 2022 Apr;14(8):469-480. doi: 10.2217/epi-2019-0142. Epub 2020 Dec 8.

Abstract

Aims: Given the reversibility of methylation, biomarkers with discriminating ability are of great interest for targeted therapeutic sites. Materials & methods: Methylation array data of 461 lung adenocarcinoma (LUAD) patients comprising of 458 tumor and 32 LUAD paracancerous samples were compared using partial least squares discrimination analysis and receiver operating characteristics analysis. Results: A six-DNA methylation signature (corresponding to five genes) was found to significantly discriminate normal and LUAD samples. Kyoto Encyclopedia of Genes and Genomes analysis indicated enrichment of methylation sites in the Wnt pathway in LUAD compared with controls. Conclusion: This six-DNA methylation signature demonstrated potential as a novel biomarker for diagnosis and therapeutic targets. Further, inhibition of Wnt signaling pathway may be an important step in LUAD progression.

Keywords: DNA methylation; Notch signaling pathway; Wnt signaling pathway; biomarker; lung adenocarcinoma; therapeutic target; tumor suppressor genes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenocarcinoma of Lung* / genetics
  • Biomarkers, Tumor / genetics
  • Biomarkers, Tumor / metabolism
  • DNA Methylation
  • Gene Expression Regulation, Neoplastic
  • Humans
  • Lung Neoplasms* / drug therapy
  • Lung Neoplasms* / genetics
  • Lung Neoplasms* / metabolism
  • Wnt Signaling Pathway / genetics

Substances

  • Biomarkers, Tumor