Biochemical Pathways Leading to the Formation of Wyosine Derivatives in tRNA of Archaea

Biomolecules. 2020 Dec 2;10(12):1627. doi: 10.3390/biom10121627.

Abstract

Tricyclic wyosine derivatives are present at position 37 in tRNAPhe of both eukaryotes and archaea. In eukaryotes, five different enzymes are needed to form a final product, wybutosine (yW). In archaea, 4-demethylwyosine (imG-14) is an intermediate for the formation of three different wyosine derivatives, yW-72, imG, and mimG. In this review, current knowledge regarding the archaeal enzymes involved in this process and their reaction mechanisms are summarized. The experiments aimed to elucidate missing steps in biosynthesis pathways leading to the formation of wyosine derivatives are suggested. In addition, the chemical synthesis pathways of archaeal wyosine nucleosides are discussed, and the scheme for the formation of yW-86 and yW-72 is proposed. Recent data demonstrating that wyosine derivatives are present in the other tRNA species than those specific for phenylalanine are discussed.

Keywords: Taw enzymes; Trm5 enzymes; archaea; tRNA modification; wyosine derivatives.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Archaea / genetics*
  • Archaea / metabolism*
  • Guanosine / analogs & derivatives*
  • Guanosine / biosynthesis
  • RNA, Transfer / genetics*

Substances

  • Guanosine
  • wyosine
  • RNA, Transfer