The CCR4-NOT deadenylase complex safeguards thymic positive selection by down-regulating aberrant pro-apoptotic gene expression

Nat Commun. 2020 Dec 2;11(1):6169. doi: 10.1038/s41467-020-19975-4.

Abstract

A repertoire of T cells with diverse antigen receptors is selected in the thymus. However, detailed mechanisms underlying this thymic positive selection are not clear. Here we show that the CCR4-NOT complex limits expression of specific genes through deadenylation of mRNA poly(A) tails, enabling positive selection. Specifically, the CCR4-NOT complex is up-regulated in thymocytes before initiation of positive selection, where in turn, it inhibits up-regulation of pro-apoptotic Bbc3 and Dab2ip. Elimination of the CCR4-NOT complex permits up-regulation of Bbc3 during a later stage of positive selection, inducing thymocyte apoptosis. In addition, CCR4-NOT elimination up-regulates Dab2ip at an early stage of positive selection. Thus, CCR4-NOT might control thymocyte survival during two-distinct stages of positive selection by suppressing expression levels of pro-apoptotic molecules. Taken together, we propose a link between CCR4-NOT-mediated mRNA decay and T cell selection in the thymus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis / genetics*
  • Apoptosis / immunology
  • Apoptosis Regulatory Proteins / genetics
  • Apoptosis Regulatory Proteins / immunology
  • Cell Differentiation
  • Cell Lineage / genetics
  • Cell Lineage / immunology
  • Exoribonucleases / genetics*
  • Exoribonucleases / immunology
  • Gene Expression Regulation, Developmental
  • Mice
  • Poly A / genetics
  • Poly A / immunology
  • RNA Stability
  • RNA, Messenger / genetics
  • RNA, Messenger / immunology
  • Repressor Proteins / genetics*
  • Repressor Proteins / immunology
  • Signal Transduction
  • Thymocytes / cytology
  • Thymocytes / immunology*
  • Thymus Gland / cytology
  • Thymus Gland / growth & development
  • Thymus Gland / immunology*
  • Tumor Suppressor Proteins / genetics
  • Tumor Suppressor Proteins / immunology
  • ras GTPase-Activating Proteins / genetics
  • ras GTPase-Activating Proteins / immunology

Substances

  • Apoptosis Regulatory Proteins
  • Dab2ip protein, mouse
  • PUMA protein, mouse
  • RNA, Messenger
  • Repressor Proteins
  • Tumor Suppressor Proteins
  • ras GTPase-Activating Proteins
  • Poly A
  • Exoribonucleases