Expanding the Toolbox of R-Selective Amine Transaminases by Identification and Characterization of New Members

Chembiochem. 2021 Apr 6;22(7):1232-1242. doi: 10.1002/cbic.202000692. Epub 2020 Dec 28.

Abstract

Amine transaminases (ATAs) are used to synthesize enantiomerically pure amines, which are building blocks for pharmaceuticals and agrochemicals. R-selective ATAs belong to the fold type IV PLP-dependent enzymes, and different sequence-, structure- and substrate scope-based features have been identified in the past decade. However, our knowledge is still restricted due to the limited number of characterized (R)-ATAs, with additional bias towards fungal origin. We aimed to expand the toolbox of (R)-ATAs and contribute to the understanding of this enzyme subfamily. We identified and characterized four new (R)-ATAs. The ATA from Exophiala sideris contains a motif characteristic for d-ATAs, which was previously believed to be a disqualifying factor for (R)-ATA activity. The crystal structure of the ATA from Shinella is the first from a Gram-negative bacterium. The ATAs from Pseudonocardia acaciae and Tetrasphaera japonica are the first characterized (R)-ATAs with a shortened/missing N-terminal helix. The active-site charges vary significantly between the new and known ATAs, correlating with their diverging substrate scope.

Keywords: PLP-dependent enzymes; amine transaminases; chiral amines; fold type IV; transferases.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinobacteria / enzymology
  • Amino Acid Sequence
  • Binding Sites
  • Biocatalysis
  • Catalytic Domain
  • Escherichia coli / metabolism
  • Exophiala / enzymology
  • Molecular Docking Simulation
  • Rhizobiaceae / enzymology
  • Sequence Alignment
  • Stereoisomerism
  • Substrate Specificity
  • Transaminases / chemistry
  • Transaminases / genetics
  • Transaminases / metabolism*

Substances

  • Transaminases

Supplementary concepts

  • Exophiala sideris
  • Tetrasphaera japonica