Currently Applied Molecular Assays for Identifying ESR1 Mutations in Patients with Advanced Breast Cancer

Int J Mol Sci. 2020 Nov 20;21(22):8807. doi: 10.3390/ijms21228807.

Abstract

Approximately 70% of breast cancers, the leading cause of cancer-related mortality worldwide, are positive for the estrogen receptor (ER). Treatment of patients with luminal subtypes is mainly based on endocrine therapy. However, ER positivity is reduced and ESR1 mutations play an important role in resistance to endocrine therapy, leading to advanced breast cancer. Various methodologies for the detection of ESR1 mutations have been developed, and the most commonly used method is next-generation sequencing (NGS)-based assays (50.0%) followed by droplet digital PCR (ddPCR) (45.5%). Regarding the sample type, tissue (50.0%) was more frequently used than plasma (27.3%). However, plasma (46.2%) became the most used method in 2016-2019, in contrast to 2012-2015 (22.2%). In 2016-2019, ddPCR (61.5%), rather than NGS (30.8%), became a more popular method than it was in 2012-2015. The easy accessibility, non-invasiveness, and demonstrated usefulness with high sensitivity of ddPCR using plasma have changed the trends. When using these assays, there should be a comprehensive understanding of the principles, advantages, vulnerability, and precautions for interpretation. In the future, advanced NGS platforms and modified ddPCR will benefit patients by facilitating treatment decisions efficiently based on information regarding ESR1 mutations.

Keywords: ESR1; breast cancer; droplet digital polymerase chain reaction; estrogen receptor; next-generation sequencing.

Publication types

  • Review

MeSH terms

  • Breast Neoplasms* / diagnosis
  • Breast Neoplasms* / genetics
  • DNA Methylation
  • Estrogen Receptor alpha / genetics*
  • Exome Sequencing / methods
  • Female
  • High-Throughput Nucleotide Sequencing / methods
  • Humans
  • Microarray Analysis / methods
  • Molecular Diagnostic Techniques*
  • Polymerase Chain Reaction / methods
  • Specimen Handling*

Substances

  • ESR1 protein, human
  • Estrogen Receptor alpha