Identification of aberrantly expressed circular RNAs in hyperlipidemia-induced retinal vascular dysfunction in mice

Genomics. 2021 Jan;113(1 Pt 2):593-600. doi: 10.1016/j.ygeno.2020.09.055. Epub 2020 Sep 28.

Abstract

Hyperlipidemia-induced retinal vascular dysfunction is a complex pathological process. circRNAs are important regulators of biological processes and disease progression. However, the expression pattern of circRNAs in hyperlipidemia-induced retinal vascular dysfunction remains unclear. Herein, we used a murine model of hyperlipidemia and identified 317 differentially expressed circRNAs between hyperlipidemic retinas and normolipidemic retinas by circRNA microarrays. GO analysis indicated that the host genes of dysregulated circRNAs were targeted to cell differentiation (ontology: biological process), cytoplasm (ontology: cellular component), and protein binding (ontology: molecular function). Pathway analysis revealed that circRNAs-mediated network was mostly enriched in focal adhesion signaling. Notably, circLDB1 was significantly up-regulated in the serum of coronary artery disease patients and aqueous humor of age-related macular degeneration patients. circLDB1 regulated endothelial cell viability, proliferation, and apoptosis in vitro. Thus, circRNAs are the promising targets for the prediction and diagnosis of hyperlipidemia-induced vascular diseases.

Keywords: Circular RNAs; GO analysis; Hyperlipidemia; KEGG pathway analysis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Diabetic Retinopathy / genetics*
  • Diabetic Retinopathy / metabolism
  • Female
  • Gene Regulatory Networks
  • Human Umbilical Vein Endothelial Cells / metabolism
  • Humans
  • Hyperlipidemias / genetics*
  • Hyperlipidemias / metabolism
  • Male
  • Mice
  • Mice, Inbred C57BL
  • RNA, Circular / genetics*
  • RNA, Circular / metabolism
  • Retinal Vessels / metabolism*
  • Retinal Vessels / pathology

Substances

  • RNA, Circular