Probing Synaptic Signaling with Optogenetic Stimulation and Genetically Encoded Calcium Reporters

Methods Mol Biol. 2021:2191:109-134. doi: 10.1007/978-1-0716-0830-2_8.

Abstract

Optogenetics provides a powerful approach for investigating neuronal electrophysiology at the scale required for drug discovery applications. Probing synaptic function with high throughput using optogenetics requires robust tools that enable both precise stimulation of and facile readout of synaptic activity. Here we describe two functional assays to achieve this end: (1) a pre-synaptic calcium assay that utilizes the channelrhodopsin, CheRiff, patterned optogenetic stimulus, and the pre-synaptically targeted calcium reporter jRGECO1a to monitor pre-synaptic changes in calcium influx and (2) a synaptic transmission assay in which CheRiff and cytosolic jRGECO1a are expressed in non-overlapping sets of neurons, enabling pre-synaptic stimulation and post-synaptic readout of activity. This chapter describes the methodology and practical considerations for implementation of these two assays.

Keywords: Cav2.1; Cav2.2; CheRiff; Optogenetics; Synaptic signaling; jRGECO1a.

MeSH terms

  • Animals
  • Calcium / metabolism*
  • Calcium Channels, N-Type / genetics
  • Channelrhodopsins / genetics*
  • Humans
  • Neurons / metabolism*
  • Optogenetics / methods*
  • Rats
  • Signal Transduction / genetics
  • Synapses / genetics
  • Synapsins / chemistry
  • Synaptic Transmission / genetics

Substances

  • CACNA1B protein, human
  • Calcium Channels, N-Type
  • Channelrhodopsins
  • SYN1 protein, human
  • Synapsins
  • voltage-dependent calcium channel (P-Q type)
  • Calcium