Discovery of Sulfated Small Molecule Inhibitors of Matrix Metalloproteinase-8

Biomolecules. 2020 Aug 9;10(8):1166. doi: 10.3390/biom10081166.

Abstract

Elevated matrix metalloproteinase-8 (MMP-8) activity contributes to the etiology of many diseases, including atherosclerosis, pulmonary fibrosis, and sepsis. Yet, very few small molecule inhibitors of MMP-8 have been identified. We reasoned that the synthetic non-sugar mimetics of glycosaminoglycans may inhibit MMP-8 because natural glycosaminoglycans are known to modulate the functions of various MMPs. The screening a library of 58 synthetic, sulfated mimetics consisting of a dozen scaffolds led to the identification of only two scaffolds, including sulfated benzofurans and sulfated quinazolinones, as promising inhibitors of MMP-8. Interestingly, the sulfated quinazolinones displayed full antagonism of MMP-8 and sulfated benzofuran appeared to show partial antagonism. Of the two, sulfated quinazolinones exhibited a >10-fold selectivity for MMP-8 over MMP-9, a closely related metalloproteinase. Molecular modeling suggested the plausible occupancy of the S1' pocket on MMP-8 as the distinguishing feature of the interaction. Overall, this work provides the first proof that the sulfated mimetics of glycosaminoglycans could lead to potent, selective, and catalytic activity-tunable, small molecular inhibitors of MMP-8.

Keywords: drug discovery; glycosaminoglycans; matrix metalloproteinases; small molecule inhibitors.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Benzofurans / chemistry
  • Biomimetics
  • Computational Biology
  • Drug Discovery
  • Glycosaminoglycans / chemistry*
  • Matrix Metalloproteinase 8 / chemistry*
  • Matrix Metalloproteinase 9 / chemistry
  • Matrix Metalloproteinase Inhibitors / chemistry*
  • Models, Molecular
  • Quinazolinones / chemistry
  • Small Molecule Libraries
  • Sulfates / chemistry*

Substances

  • Benzofurans
  • Glycosaminoglycans
  • Matrix Metalloproteinase Inhibitors
  • Quinazolinones
  • Small Molecule Libraries
  • Sulfates
  • MMP8 protein, human
  • Matrix Metalloproteinase 8
  • Matrix Metalloproteinase 9