Nitrogen coordinated import and export of arginine across the yeast vacuolar membrane

PLoS Genet. 2020 Aug 10;16(8):e1008966. doi: 10.1371/journal.pgen.1008966. eCollection 2020 Aug.

Abstract

The vacuole of the yeast Saccharomyces cerevisiae plays an important role in nutrient storage. Arginine, in particular, accumulates in the vacuole of nitrogen-replete cells and is mobilized to the cytosol under nitrogen starvation. The arginine import and export systems involved remain poorly characterized, however. Furthermore, how their activity is coordinated by nitrogen remains unknown. Here we characterize Vsb1 as a novel vacuolar membrane protein of the APC (amino acid-polyamine-organocation) transporter superfamily which, in nitrogen-replete cells, is essential to active uptake and storage of arginine into the vacuole. A shift to nitrogen starvation causes apparent inhibition of Vsb1-dependent activity and mobilization of stored vacuolar arginine to the cytosol. We further show that this arginine export involves Ypq2, a vacuolar protein homologous to the human lysosomal cationic amino acid exporter PQLC2 and whose activity is detected only in nitrogen-starved cells. Our study unravels the main arginine import and export systems of the yeast vacuole and suggests that they are inversely regulated by nitrogen.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / genetics
  • Arginine / metabolism*
  • Biological Transport / genetics
  • Humans
  • Intracellular Membranes / metabolism
  • Lysosomes / genetics
  • Membrane Transport Proteins / genetics
  • Membrane Transport Proteins / metabolism
  • Nitrogen / metabolism*
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / genetics*
  • Vacuoles / genetics
  • Vacuoles / metabolism

Substances

  • Amino Acids
  • Membrane Transport Proteins
  • Saccharomyces cerevisiae Proteins
  • Arginine
  • Nitrogen

Grants and funding

M.C. was the recipient of a PhD fellowship from the Fonds pour la Formation à la Recherche dans l'Industrie et dans l'Agriculture (FRIA). This work was supported by a PDR grant (nr. 746 23655065) by the Fonds National de la Recherche Scientifique (FNRS) (Fédération Wallonie-Bruxelles, Belgium), the International Brachet Foundation, and by a grant (nr. CRFF-2015-01) from the Cystinosis Research Foundation. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.