Prevalence of germline GATA2 and SAMD9/9L variants in paediatric haematological disorders with monosomy 7

Br J Haematol. 2020 Dec;191(5):835-843. doi: 10.1111/bjh.17006. Epub 2020 Aug 7.

Abstract

Monosomy 7 (-7) occurs in various types of paediatric myeloid disorders and has a poor prognosis. Recent studies have demonstrated that patients with germline gain-of-function SAMD9/9L variants and loss-of-function GATA2 variants are prone to developing myelodysplastic syndrome (MDS) associated with -7. However, the prevalence of the genetic variants among paediatric haematologic disorders with -7 is unknown. The present study screened germline variants of GATA2 and SAMD9/9L in 25 patients with various types of paediatric haematological disorders associated with -7. The diagnoses of the 25 patients included MDS (n = 10), acute myeloid leukaemia (AML) and myeloid sarcomas (n = 9), juvenile myelomonocytic leukaemia (n = 3) and other disorders (n = 3). Seven patients with a germline pathogenic GATA2 variant were found. For SAMD9/9L screening, next-generation sequencing was used to detect low-abundance variants and found four novel germline variants. Functional analysis revealed that three out of the four variants showed growth-restricting capacity in vitro and thus, were judged to be pathogenic. Cases with GATA2 mutation tended to be older, compared to those with SAMD9/9L mutations. In conclusion, GATA2 and SAMD9/9L were sequenced in 25 patients with paediatric haematologic disorders associated with -7, and 40% of them were found to have some pathogenic germline variants in the three genes.

Keywords: GATA2; SAMD9; SAMD9L; monosomy 7; pediatrics.

Publication types

  • Clinical Trial
  • Multicenter Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Child
  • Child, Preschool
  • Chromosome Deletion
  • Chromosomes, Human, Pair 7 / genetics
  • Female
  • GATA2 Transcription Factor / genetics*
  • Germ-Line Mutation*
  • Hematologic Neoplasms / epidemiology
  • Hematologic Neoplasms / genetics*
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Infant
  • Infant, Newborn
  • Intracellular Signaling Peptides and Proteins / genetics*
  • Male
  • Myelodysplastic Syndromes / epidemiology
  • Myelodysplastic Syndromes / genetics*
  • Prevalence
  • Tumor Suppressor Proteins / genetics*

Substances

  • GATA2 Transcription Factor
  • GATA2 protein, human
  • Intracellular Signaling Peptides and Proteins
  • SAMD9 protein, human
  • SAMD9L protein, human
  • Tumor Suppressor Proteins

Supplementary concepts

  • Chromosome 7, monosomy