Accelerating Chan-Vese model with cross-modality guided contrast enhancement for liver segmentation

Comput Biol Med. 2020 Sep:124:103930. doi: 10.1016/j.compbiomed.2020.103930. Epub 2020 Jul 29.

Abstract

Accurate and fast liver segmentation remains a challenging and important task for clinicians. Segmentation algorithms are slow and inaccurate due to noise and low quality images in computed tomography (CT) abdominal scans. Chan-Vese is an active contour based powerful and flexible method for image segmentation due to superior noise robustness. However, it is quite slow due to time-consuming partial differential equations, especially for large medical datasets. This can pose a problem for a real-time implementation of liver segmentation and hence, an efficient parallel implementation is highly desirable. Another important aspect is the contrast of CT liver images. Liver slices are sometimes very low in contrast which reduces the overall quality of liver segmentation. Hence, we implement cross-modality guided liver contrast enhancement as a pre-processing step to liver segmentation. GPU implementation of Chan-Vese improves average speedup by 99.811 (± 7.65) times and 14.647 (± 1.155) times with and without enhancement respectively in comparison with the CPU. Average dice, sensitivity and accuracy of liver segmentation are 0.656, 0.816 and 0.822 respectively on the original liver images and 0.877, 0.964 and 0.956 respectively on the enhanced liver images improving the overall quality of liver segmentation.

Keywords: Chan–Vese; Contrast enhancement; GPU; Image segmentation; Persistence.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms*
  • Image Processing, Computer-Assisted*
  • Liver / diagnostic imaging
  • Tomography, X-Ray Computed*