Ribosomal Protein uL11 as a Regulator of Metabolic Circuits Related to Aging and Cell Cycle

Cells. 2020 Jul 21;9(7):1745. doi: 10.3390/cells9071745.

Abstract

Aging is a biological phenomenon common to all living organisms. It is thought that the rate of aging is influenced by diverse factors, in many cases related to the control of energy metabolism, i.e., the so-called pro-longevity effects of starvation. Translation, regarded as the main energy consumption process, lies at the center of interest, as it has a significant impact on the longevity phenomenon. It has been shown that perturbations in the translational apparatus may lead to a lower rate of aging. Therefore, the main aim of this study was to investigate aging in relation to the protein biosynthesis circuit, taking into account the uL11 ribosomal protein as a vital ribosomal element. To this end, we used set of yeast mutants with deleted single uL11A or uL11B genes and a double disruptant uL11AB mutant. We applied an integrated approach analyzing a broad range of biological parameters of yeast mutant cells, especially the longevity phenomenon, supplemented with biochemical and high throughput transcriptomic and metobolomic approaches. The analysis showed that the longevity phenomenon is not fully related to the commonly considered energy restriction effect, thus the slow-down of translation does not represent the sole source of aging. Additionally, we showed that uL11 can be classified as a moonlighting protein with extra-ribosomal function having cell-cycle regulatory potential.

Keywords: aging; cell-cycle; hypertrophy; lifespan; paralogs; ribosome; translation; uL11.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Cell Cycle*
  • Cell Wall / metabolism
  • Gene Deletion
  • Gene Expression Regulation, Fungal
  • Gene Ontology
  • Metabolic Networks and Pathways*
  • Mutation / genetics
  • Oxidative Stress
  • Phenotype
  • Polyribosomes / metabolism
  • Principal Component Analysis
  • Protein Biosynthesis
  • Protein Isoforms / metabolism
  • Ribosomal Proteins / chemistry
  • Ribosomal Proteins / metabolism*
  • Saccharomyces cerevisiae / cytology*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism*
  • Saccharomyces cerevisiae Proteins / chemistry
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Spectrum Analysis, Raman
  • Time Factors
  • Transcription, Genetic
  • Vacuoles / metabolism

Substances

  • Protein Isoforms
  • Ribosomal Proteins
  • Rpl12 protein, S cerevisiae
  • Saccharomyces cerevisiae Proteins