AKUImg: A database of cartilage images of Alkaptonuria patients

Comput Biol Med. 2020 Jul:122:103863. doi: 10.1016/j.compbiomed.2020.103863. Epub 2020 Jun 18.

Abstract

ApreciseKUre is a multi-purpose digital platform facilitating data collection, integration and analysis for patients affected by Alkaptonuria (AKU), an ultra-rare autosomal recessive genetic disease. We present an ApreciseKUre plugin, called AKUImg, dedicated to the storage and analysis of AKU histopathological slides, in order to create a Precision Medicine Ecosystem (PME), where images can be shared among registered researchers and clinicians to extend the AKU knowledge network. AKUImg includes a new set of AKU images taken from cartilage tissues acquired by means of a microscopic technique. The repository, in accordance to ethical policies, is publicly available after a registration request, to give to scientists the opportunity to study, investigate and compare such precious resources. AKUImg is also integrated with a preliminary but accurate predictive system able to discriminate the presence/absence of AKU by comparing histopatological affected/control images. The algorithm is based on a standard image processing approach, namely histogram comparison, resulting to be particularly effective in performing image classification, and constitutes a useful guide for non-AKU researchers and clinicians.

Keywords: Alkaptonuria; Histopatological images; Precision medicine; Rare disease.

MeSH terms

  • Alkaptonuria* / diagnostic imaging
  • Cartilage / diagnostic imaging
  • Databases, Factual
  • Ecosystem
  • Humans
  • Precision Medicine