Identification of a Na+-Binding Site near the Oxygen-Evolving Complex of Spinach Photosystem II

Biochemistry. 2020 Aug 4;59(30):2823-2831. doi: 10.1021/acs.biochem.0c00303. Epub 2020 Jul 21.

Abstract

The oxygen-evolving complex (OEC) of photosystem II (PSII) is an oxomanganese cluster composed of four redox-active Mn ions and one redox-inactive Ca2+ ion, with two nearby bound Cl- ions. Sodium is a common counterion of both chloride and hydroxide anions, and a sodium-specific binding site has not been identified near the OEC. Here, we find that the oxygen-evolution activity of spinach PSII increases with Na+ concentration, particularly at high pH. A Na+-specific binding site next to the OEC, becomes available after deprotonation of the D1-H337 amino acid residue, is suggested by the analysis of two recently published PSII cryo-electron microscopy maps in combination with quantum mechanical calculations and multiconformation continuum electrostatics simulations.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Binding Sites
  • Density Functional Theory
  • Hydrogen-Ion Concentration
  • Ligands
  • Models, Molecular
  • Oxygen / metabolism*
  • Photosystem II Protein Complex / metabolism*
  • Photosystem II Protein Complex / ultrastructure
  • Sodium / metabolism*
  • Spinacia oleracea / metabolism*
  • Static Electricity

Substances

  • Ligands
  • Photosystem II Protein Complex
  • Sodium
  • Oxygen