The maturase HydF enables [FeFe] hydrogenase assembly via transient, cofactor-dependent interactions

J Biol Chem. 2020 Aug 14;295(33):11891-11901. doi: 10.1074/jbc.RA119.011419. Epub 2020 Jul 3.

Abstract

[FeFe] hydrogenases have attracted extensive attention in the field of renewable energy research because of their remarkable efficiency for H2 gas production. H2 formation is catalyzed by a biologically unique hexanuclear iron cofactor denoted the H-cluster. The assembly of this cofactor requires a dedicated maturation machinery including HydF, a multidomain [4Fe4S] cluster protein with GTPase activity. HydF is responsible for harboring and delivering a precatalyst to the apo-hydrogenase, but the details of this process are not well understood. Here, we utilize gas-phase electrophoretic macromolecule analysis to show that a HydF dimer forms a transient interaction complex with the hydrogenase and that the formation of this complex depends on the cofactor content on HydF. Moreover, Fourier transform infrared, electron paramagnetic resonance, and UV-visible spectroscopy studies of mutants of HydF show that the isolated iron-sulfur cluster domain retains the capacity for binding the precatalyst in a reversible fashion and is capable of activating apo-hydrogenase in in vitro assays. These results demonstrate the central role of the iron-sulfur cluster domain of HydF in the final stages of H-cluster assembly, i.e. in binding and delivering the precatalyst.

Keywords: Fourier transform IR (FTIR); chaperone; cofactor; hydrogenase; iron-sulfur protein; mass spectrometry (MS); metal ion–protein interaction; metallo-cofactor assembly; metalloenzyme; protein–protein interaction; scaffold.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism*
  • Chlamydomonas reinhardtii / chemistry
  • Chlamydomonas reinhardtii / metabolism*
  • Hydrogenase / chemistry
  • Hydrogenase / metabolism*
  • Iron-Sulfur Proteins / chemistry
  • Iron-Sulfur Proteins / metabolism*
  • Models, Molecular
  • Plant Proteins / chemistry
  • Plant Proteins / metabolism*
  • Protein Conformation
  • Protein Domains
  • Protein Multimerization
  • Thermotoga maritima / chemistry
  • Thermotoga maritima / metabolism*

Substances

  • Bacterial Proteins
  • Iron-Sulfur Proteins
  • Plant Proteins
  • Hydrogenase

Associated data

  • PDB/5KH0
  • PDB/3LX4
  • PDB/3QQ5