Investigations on the E/Z-isomerism of neonicotinoids

J Comput Aided Mol Des. 2021 Apr;35(4):517-529. doi: 10.1007/s10822-020-00326-w. Epub 2020 Jul 2.

Abstract

We investigate the minimum-energy path for the rotation of formal C=N double bonds in molecules with guanidine-like substructures as present in the chemical class of neonicotinoids. The transitions between the E- and Z-isomers of several neonicotinoids using scans of the torsional potential energy hypersurfaces are quantified at the DFT-level of theory. The validity of using this ansatz is checked by single-point CCSD(T) calculations for model systems like nitroguanidine. A combined approach of theory and experiment permits to unambiguously identify the relevant isomers present at ambient conditions. As an example, MP2-GIAO predictions of the NMR spectra of E- and Z-Clothianidin are experimentally confirmed by low-temperature NMR-experiments identifying for the first time the hitherto unknown Z-Isomer of Clothianidin.

Keywords: CCSD(T); COSMO-RS; DFT; GIAO; MP2; Potential energy surface.

MeSH terms

  • Insecticides / chemistry*
  • Isomerism
  • Models, Molecular
  • Neonicotinoids / chemistry*
  • Quantum Theory
  • Stereoisomerism
  • Thermodynamics

Substances

  • Insecticides
  • Neonicotinoids