Proteome Analysis Reveals Syndecan 1 Regulates Porcine Sapelovirus Replication

Int J Mol Sci. 2020 Jun 19;21(12):4386. doi: 10.3390/ijms21124386.

Abstract

Porcine sapelovirus A (PSV) is a single stranded, positive-sense, non-enveloped RNA virus that causes enteritis, pneumonia, polioencephalomyelitis, and reproductive disorders in pigs. Research on PSV infection and interaction with host cells is unclear. In this study, we applied tandem mass tag proteomics analysis to investigate the differentially expressed proteins (DEPs) in PSV-infected pig kidney (PK)-15 cells and explored the interactions between PSV and host cells. Here we mapped 181 DEPs, including 59 up-regulated and 122 down-regulated DEPs. Among them, osteopontin (SPP1), induced protein with tetratricopeptide repeats 5 (IFIT5), ISG15 ubiquitin-like modifier (ISG15), vinculin (VCL), and syndecan-1 (SDC1) were verified significantly changed using RT-qPCR. Additionally, overexpression of SDC1 promoted PSV viral protein (VP)1 synthesis and virus titer, and silencing of SDC1 revealed the opposite results. Our findings show that SDC1 is a novel host protein and plays crucial roles in regulating PSV replication.

Keywords: quantitative proteomics; replication; sapelovirus; tandem mass tag.

MeSH terms

  • Animals
  • Cell Line
  • Gene Expression Regulation
  • Models, Biological
  • Picornaviridae / physiology*
  • Picornaviridae Infections / genetics
  • Picornaviridae Infections / metabolism*
  • Picornaviridae Infections / veterinary
  • Proteomics / methods*
  • Swine
  • Swine Diseases / genetics
  • Swine Diseases / metabolism
  • Swine Diseases / virology*
  • Syndecan-1 / genetics
  • Syndecan-1 / metabolism*
  • Tandem Mass Spectrometry
  • Viral Load
  • Viral Proteins / metabolism
  • Virus Replication

Substances

  • Syndecan-1
  • Viral Proteins