Theoretical Study of the Structures of 4-(2,3,5,6-Tetrafluoropyridyl)Diphenylphosphine Oxide and Tris(Pentafluorophenyl)Phosphine Oxide: Why Does the Crystal Structure of (Tetrafluoropyridyl)Diphenylphosphine Oxide Have Two Different P=O Bond Lengths?

Molecules. 2020 Jun 16;25(12):2778. doi: 10.3390/molecules25122778.

Abstract

The crystal structure of 4-(2,3,5,6-tetrafluoropyridyl)diphenylphosphine oxide (1) contains two independent molecules in the asymmetric unit. Although the molecules are virtually identical in all other aspects, the P=O bond distances differ by ca. 0.02 Å. In contrast, although tris(pentafluorophenyl)phosphine oxide (2) has a similar crystal structure, the P=O bond distances of the two independent molecules are identical. To investigate the reason for the difference, a density functional theory study was undertaken. Both structures comprise chains of molecules. The attraction between molecules of 1, which comprises lone pair-π, weak hydrogen bonding and C-H∙∙∙arene interactions, has energies of 70 and 71 kJ mol-1. The attraction between molecules of 2 comprises two lone pair-π interactions, and has energies of 99 and 100 kJ mol-1. There is weak hydrogen bonding between molecules of adjacent chains involving the oxygen atom of 1. For one molecule, this interaction is with a symmetry independent molecule, whereas for the other, it also occurs with a symmetry related molecule. This provides a reason for the difference in P=O distance. This interaction is not possible for 2, and so there is no difference between the P=O distances of 2.

Keywords: X-ray crystal structure; density functional theory calculations; phosphine oxides.

MeSH terms

  • Crystallography, X-Ray
  • Hydrogen Bonding
  • Models, Molecular*
  • Molecular Structure
  • Organophosphorus Compounds / chemistry*
  • Phosphines / chemistry*

Substances

  • Organophosphorus Compounds
  • Phosphines
  • tris(pentafluorophenyl)phosphine
  • triphenylphosphine oxide