A Gaseous Milieu: Extending the Boundaries of the Rhizosphere

Trends Microbiol. 2020 Jul;28(7):536-542. doi: 10.1016/j.tim.2020.02.016. Epub 2020 Mar 26.

Abstract

Plant root activities shape microbial community functioning in the soil, making the rhizosphere the epicenter of soil biogeochemical processes. With this opinion article, we argue to rethink the rhizosphere boundaries: as gases can diffuse several centimeters away from the roots into the soil, the portion of soil influenced by root activities is larger than the strictly root-adhering soil. Indeed, gases are key drivers of biogeochemical processes due to their roles as energy sources or communication molecules, which has the potential to modify microbial community structure and functioning. In order to get a more holistic perspective on this key environment, we advocate for interdisciplinarity in rhizosphere research by combining knowledge of soluble compounds with gas dynamics.

Keywords: biogeochemical processes; plant–microbe interactions; rhizosphere; trace gases; volatile organic compounds (VOCs).

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Carbon Dioxide / metabolism
  • Gases / metabolism*
  • Hydrogen / metabolism
  • Microbiota / physiology*
  • Oxygen / metabolism
  • Plant Roots / microbiology*
  • Plants / microbiology*
  • Rhizosphere*
  • Soil / chemistry
  • Soil Microbiology
  • Volatile Organic Compounds / metabolism

Substances

  • Gases
  • Soil
  • Volatile Organic Compounds
  • Carbon Dioxide
  • Hydrogen
  • Oxygen