A Self-Organized PLT/Auxin/ARR-B Network Controls the Dynamics of Root Zonation Development in Arabidopsis thaliana

Dev Cell. 2020 May 18;53(4):431-443.e23. doi: 10.1016/j.devcel.2020.04.004. Epub 2020 May 7.

Abstract

During organogenesis, coherent organ growth arises from spatiotemporally coordinated decisions of individual cells. In the root of Arabidopsis thaliana, this coordination results in the establishment of a division and a differentiation zone. Cells continuously move through these zones; thus, a major question is how the boundary between these domains, the transition zone, is formed and maintained. By combining molecular genetics with computational modeling, we reveal how an auxin/PLETHORA/ARR-B network controls these dynamic patterning processes. We show that after germination, cell division causes a drop in distal PLT2 levels that enables transition zone formation and ARR12 activation. The resulting PLT2-ARR12 antagonism controls expansion of the division zone (the meristem). The successive ARR1 activation antagonizes PLT2 through inducing the cell-cycle repressor KRP2, thus setting final meristem size. Our work indicates a key role for the interplay between cell division dynamics and regulatory networks in root zonation and transition zone patterning.

Keywords: PLETHORAs; cell differentiation; cell division; computational modeling; cytokinin; organ growth; root development.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / drug effects
  • Arabidopsis / genetics
  • Arabidopsis / growth & development*
  • Arabidopsis / metabolism
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism*
  • Cell Cycle Proteins / genetics
  • Cell Cycle Proteins / metabolism
  • Gene Expression Regulation, Developmental
  • Indoleacetic Acids / pharmacology*
  • Plant Growth Regulators / pharmacology
  • Plant Roots / drug effects
  • Plant Roots / genetics
  • Plant Roots / growth & development*
  • Plant Roots / metabolism
  • Transcription Factors / genetics
  • Transcription Factors / metabolism*

Substances

  • ARR12 protein, Arabidopsis
  • Arabidopsis Proteins
  • Cell Cycle Proteins
  • ICK2 protein, Arabidopsis
  • Indoleacetic Acids
  • PLT1 protein, Arabidopsis
  • Plant Growth Regulators
  • Transcription Factors