Guanine Radicals Generated in Telomeric G-Quadruplexes by Direct Absorption of Low-Energy UV Photons: Effect of Potassium Ions

Molecules. 2020 Apr 30;25(9):2094. doi: 10.3390/molecules25092094.

Abstract

The study deals with the primary species, ejected electrons, and guanine radicals, leading to oxidative damage, that is generated in four-stranded DNA structures (guanine quadruplexes) following photo-ionization by low-energy UV radiation. Performed by nanosecond transient absorption spectroscopy with 266 nm excitation, it focusses on quadruplexes formed by folding of GGG(TTAGGG)3 single strands in the presence of K+ ions, TEL21/K+. The quantum yield for one-photon ionization (9.4 × 10-3) was found to be twice as high as that reported previously for TEL21/Na+. The overall population of guanine radicals decayed faster, their half times being, respectively, 1.4 and 6.7 ms. Deprotonation of radical cations extended over four orders of magnitude of time; the faster step, concerning 40% of their population, was completed within 500 ns. A reaction intermediate, issued from radicals, whose absorption spectrum peaked around 390 nm, was detected.

Keywords: DNA; electron holes; guanine radicals; guanine-quadruplexes; oxidative damage; photo-ionization; reaction dynamics; time-resolved spectroscopy.

MeSH terms

  • Cations / chemistry
  • Free Radicals / chemistry*
  • G-Quadruplexes*
  • Guanine / biosynthesis
  • Guanine / chemistry*
  • Photons*
  • Potassium / chemistry*
  • Spectrum Analysis
  • Telomere / chemistry*
  • Telomere / genetics
  • Ultraviolet Rays* / adverse effects

Substances

  • Cations
  • Free Radicals
  • Guanine
  • Potassium