Fluorescence determination of the activity of O6-methylguanine-DNA methyltransferase based on the activation of restriction endonuclease and the use of graphene oxide

Mikrochim Acta. 2020 Apr 29;187(5):300. doi: 10.1007/s00604-020-04280-0.

Abstract

A fluorescence method is described for the determination of the activity of O6-methylguanine-DNA methyltransferase (MGMT). It is based on the activation of restriction endonuclease PvuII and the adsorbing a fluorophore-labelled DNA onto the surface of graphene oxide (GO). MGMT activity removes the methyl group from O6-methylguanine (O6MeG) in the fluorophore-labelled DNA to unblock the specific recognition site for further hydrolysis reaction of restriction endonuclease PvuII. The endonuclease catalytic reaction releases fluorophores (5-carboxyfluorescein) from fluorophore-labelled DNA, which can avoid fluorescence quenching by GO, creating an abundance of the fluorescence signal. The fluorescence increase in the assay is thus directly dependent on the MGMT activity. Under the optimal conditions with the emission wavelength of 519 nm (exitation at 494 nm), the activity of the MGMT can be determined in the range 0.5 to 35 ng mL-1 with a detection limit of 0.15 ng mL-1. This is extremely sensitive for the determination of MGMT. The short time of analysis (2 h) is superior to many reported strategies. The method can also be extended for the rapid and sensitive activity assay of other DNA repair enzymes by designing a proper substrate DNA. Conceivably, the technique represents a powerful tool for diagnosis and drug exploitation. Graphical abstract Schematic representation of the fluorescence method for MGMT activity assay.

Keywords: DNA repair enzyme; Fluorescence quenching; MGMT; Nanomaterial; PvuII.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biocatalysis
  • DNA Restriction Enzymes / metabolism*
  • Fluoresceins / chemistry*
  • Fluoresceins / metabolism
  • Fluorescence*
  • Fluorescent Dyes / chemistry*
  • Fluorescent Dyes / metabolism
  • Graphite / chemistry*
  • Graphite / metabolism
  • Hydrolysis
  • O(6)-Methylguanine-DNA Methyltransferase / analysis*
  • O(6)-Methylguanine-DNA Methyltransferase / metabolism
  • Spectrometry, Fluorescence

Substances

  • Fluoresceins
  • Fluorescent Dyes
  • graphene oxide
  • 4-carboxyfluorescein
  • Graphite
  • O(6)-Methylguanine-DNA Methyltransferase
  • DNA Restriction Enzymes