Simultaneous identification of 6 pathogens causing porcine reproductive failure by using multiplex ligation-dependent probe amplification

Transbound Emerg Dis. 2020 Nov;67(6):2467-2474. doi: 10.1111/tbed.13585. Epub 2020 May 5.

Abstract

We developed a multiplex ligation-dependent probe amplification (MLPA) assay for the simultaneous detection of 6 clinically relevant viral pathogens causing porcine reproductive failure, that is porcine reproductive and respiratory syndrome virus (PRRSV), Japanese encephalitis virus (JEV), classical swine fever virus (CSFV), porcine circovirus type 2 (PCV2), pseudorabies virus (PRV) and porcine parvovirus (PPV). The limits of detection for the assay varied among the 6 target organisms from 1 to 8 copies per MLPA assay. The MLPA assay was evaluated with 346 heparinized porcine umbilical cord blood specimens, and the results of the assay were compared to those of real-time PCR. The MLPA assay showed specificities and sensitivities of 99.2% and 100%, respectively, for PRRSV; 100% and 100%, respectively, for CSFV, PCV2, PRV and PPV. No sample was found to be positive for JEV by either the MLPA assay or the real-time PCR. In conclusion, the MLPA assay has comparable clinical sensitivity to that of real-time PCR assay and provides a useful tool for fast screening porcine reproductive failure-associated viruses.

Keywords: Multiplex Ligation-dependent Probe Amplification (MLPA); porcine reproductive failure; viral disease.

MeSH terms

  • Animals
  • Circovirus / genetics
  • Circovirus / isolation & purification*
  • Classical Swine Fever Virus / genetics
  • Classical Swine Fever Virus / isolation & purification*
  • Female
  • Fetal Blood / virology
  • Herpesvirus 1, Suid / genetics
  • Herpesvirus 1, Suid / isolation & purification*
  • Limit of Detection
  • Multiplex Polymerase Chain Reaction / veterinary
  • Parvovirus, Porcine / genetics
  • Parvovirus, Porcine / isolation & purification*
  • Porcine respiratory and reproductive syndrome virus / genetics
  • Porcine respiratory and reproductive syndrome virus / isolation & purification*
  • Sensitivity and Specificity
  • Swine
  • Swine Diseases / virology*
  • Virus Diseases / veterinary*
  • Virus Diseases / virology