A minor population of macrophage-tropic HIV-1 variants is identified in recrudescing viremia following analytic treatment interruption

Proc Natl Acad Sci U S A. 2020 May 5;117(18):9981-9990. doi: 10.1073/pnas.1917034117. Epub 2020 Apr 16.

Abstract

HIV-1 persists in cellular reservoirs that can reignite viremia if antiretroviral therapy (ART) is interrupted. Therefore, insight into the nature of those reservoirs may be revealed from the composition of recrudescing viremia following treatment cessation. A minor population of macrophage-tropic (M-tropic) viruses was identified in a library of recombinant viruses constructed with individual envelope genes that were obtained from plasma of six individuals undergoing analytic treatment interruption (ATI). M-tropic viruses could also be enriched from post-ATI plasma using macrophage-specific (CD14) but not CD4+ T cell-specific (CD3) antibodies, suggesting that M-tropic viruses had a macrophage origin. Molecular clock analysis indicated that the establishment of M-tropic HIV-1 variants predated ATI. Collectively, these data suggest that macrophages are a viral reservoir in HIV-1-infected individuals on effective ART and that M-tropic variants can appear in rebounding viremia when treatment is interrupted. These findings have implications for the design of curative strategies for HIV-1.

Keywords: HIV-1 reservoirs; analytical treatment interruption; macrophages.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Anti-Retroviral Agents / pharmacology
  • Antiretroviral Therapy, Highly Active
  • Biological Clocks / genetics*
  • CD4-Positive T-Lymphocytes / pathology
  • HIV Infections / genetics*
  • HIV Infections / pathology
  • HIV Infections / virology
  • HIV Seropositivity
  • HIV-1 / genetics*
  • HIV-1 / pathogenicity
  • Humans
  • Macrophages / immunology
  • Macrophages / pathology
  • Proviruses / genetics
  • Viral Load / genetics
  • Viremia / genetics*
  • Viremia / pathology
  • Viremia / virology

Substances

  • Anti-Retroviral Agents

Associated data

  • GENBANK/MK250122
  • GENBANK/MK250216
  • GENBANK/MK250217
  • GENBANK/250273
  • GENBANK/MK250274
  • GENBANK/MK250362
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  • GENBANK/MK254839
  • GENBANK/MN395385
  • GENBANK/MK250100
  • GENBANK/MK250121
  • GENBANK/MK254843
  • GENBANK/MK254890
  • GENBANK/MK254895
  • GENBANK/MK254897
  • GENBANK/MK254911
  • GENBANK/MK254912
  • GENBANK/MK254914
  • GENBANK/MK254952
  • GENBANK/MK254959
  • GENBANK/MK254964
  • GENBANK/MK254967