Chryseobacterium salivictor sp. nov., a plant-growth-promoting bacterium isolated from freshwater

Antonie Van Leeuwenhoek. 2020 Jul;113(7):989-995. doi: 10.1007/s10482-020-01411-8. Epub 2020 Apr 15.

Abstract

A Gram-stain-negative, non-motile, rod-shaped bacterial strain, designated NBC 122T, was isolated from freshwater of the Nakdong River Republic of Korea. Growth occurred at pH 5.0-8.0 (optimum, pH 7.0), at 4-37 °C (optimum, 25 °C), and with 0-3.5% (w/v) NaCl (optimum, 1%). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain NBC 122T belongs to the genus Chryseobacterium and is most closely related to Chryseobacterium antarcticum AT1013T (97.85%). The average nucleotide identity and in silico DNA-DNA hybridization (DDH) values between strain NBC 122T and related Chryseobacterium species were 77.77-80.28 and 20.9-23.2%, respectively. The strain NBC 122T contained MK-6 as the major respiratory quinone. The major fatty acids included anteiso C15:0, iso C15:0, summed feature 9 (C17:1 iso ω9c, C16:0 10-methyl) and iso C17:0 3-OH, and the polar lipids were phosphatidylethanolamine, five unidentified aminolipids and six unidentified lipids. The DNA G + C content was 37.5 mol%. On the basis of a 16S rRNA gene phylogeny and comparative phenotypic analyses, strain NBC 122T represents a novel species in the genus Chryseobacterium, for which the name Chryseobacterium salivictor sp. nov. is proposed. The type strain is NBC122T (= KCTC 72248T = JCM 33980T).

Keywords: Chryseobacterium; Plant-growth-promoting bacterium; Salt stress.

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Chryseobacterium / classification*
  • Chryseobacterium / genetics
  • Chryseobacterium / isolation & purification*
  • Chryseobacterium / physiology*
  • DNA, Bacterial / genetics
  • Fatty Acids / analysis
  • Fresh Water / microbiology*
  • Nucleic Acid Hybridization
  • Phosphatidylethanolamines
  • Phylogeny*
  • Plant Development*
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Rivers / microbiology
  • Sequence Analysis, DNA

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Phosphatidylethanolamines
  • RNA, Ribosomal, 16S
  • phosphatidylethanolamine

Supplementary concepts

  • Chryseobacterium antarcticum