Identification of host variants associated with overall survival of esophageal cancer patients receiving platinum-based therapy

Pharmacogenomics. 2020 Apr;21(6):393-402. doi: 10.2217/pgs-2019-0165. Epub 2020 Apr 14.

Abstract

Aim: Clinical features of esophageal cancer (EC) patients have poor prognostic power. Thus, it is paramount to discover biomarkers that can allow a more accurate survival prediction. Methods: To detect genetic variants associated with survival, DNA from 120 patients treated with cisplatin-based neoadjuvant therapy were genotyped using drug metabolism enzymes and transporters array. Results: We identified two variants: the rs2038067 in PPARD (p = 0.0004) and the rs683369 (F160L) in SLC22A1 (p = 0.001). Their prognostic power was greater than that of clinical stage alone (p = 0.017) and comparable to that of response to neoadjuvant therapy (p = 0.71). Interestingly, the prognostic accuracy of response models increased significantly when genetic variables were included (p = 0.003). Conclusion: Our data, though preliminary, strengthen the potential utility of germline variants for a better-tailored management of EC patients.

Keywords: DMET array; PPARD; SLC22A1; cisplatin-based therapy; esophageal cancer; germline variants; overall survival; pharmacogenetics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Antineoplastic Agents / therapeutic use*
  • Cisplatin / therapeutic use*
  • Esophageal Neoplasms / drug therapy
  • Esophageal Neoplasms / genetics*
  • Esophageal Neoplasms / mortality
  • Female
  • Follow-Up Studies
  • Genetic Variation / genetics*
  • Humans
  • Male
  • Middle Aged
  • Neoadjuvant Therapy / methods
  • Organic Cation Transporter 1 / genetics*
  • PPAR delta / genetics*
  • Survival Rate / trends

Substances

  • Antineoplastic Agents
  • Organic Cation Transporter 1
  • PPAR delta
  • Cisplatin