Network pharmacology analysis of Chaihu Lizhong Tang treating non-alcoholic fatty liver disease

Comput Biol Chem. 2020 Jun:86:107248. doi: 10.1016/j.compbiolchem.2020.107248. Epub 2020 Mar 16.

Abstract

Background: In this study, the network pharmacological methods were used to predict the target of active components of Chaihu Lizhong Tang (CHLZT) in the treatment of non-alcoholic fatty liver disease (NAFLD).

Method: The active components of "CHLZT", their targets, and NAFLD related targets were screened by multiple databases, and the potential targets of "CHLZT" in the treatment of NAFLD were predicted. The active component-target network of "CHLZT" was constructed by Cytoscape software. The potential target of "CHLZT" for the treatment of NAFLD constructed protein-protein interaction (PPI) network in the Search Tool for the Retrieval of Interacting Genes Database (STRING). The hub genes of "CHLZT" in the treatment of NAFLD were screened by network topological parameters, and the results were verified by molecular docking. "ClusterProfiler" in R was used for Gene Ontology (GO) analysis and KEGG pathway enrichment analysis.

Results: OB ≥ 30 % and DL ≥ 0.18 were selected as the screening criteria of active components. A total of 83 active components and 456 targets were selected. Based on the evaluation of topological parameters of degree network, five hub genes for interaction with "CHLZT" therapy for NAFLD were screened, that is, AKT1, ALB, IL6, EGFR, and CASP3. The results of molecular docking showed that the active components in "CHLZT" had a good binding ability with the key targets. The enrichment analysis results showed that the treatment of NAFLD with "CHLZT" mainly involved in cofactor binding, protease binding, AGE-RAGE signaling pathway in diabetic complications, and IL-17 signaling pathway, which mediated the potential mechanism of "CHLZT" intervention in NAFLD.

Conclusion: The molecular mechanism of "CHLZT" in the treatment of NAFLD indicated the synergistic features of multi-component, multi-target, and multi-pathway of traditional Chinese medicine, which provided an important scientific basis for further elucidating the mechanism of "CHLZT" in the treatment of NAFLD.

Keywords: Chaihulizhong Tang (CHLZT); Docking stimulation; Network pharmacology; Non-alcoholic fatty liver disease (NAFLD); Target protein interaction.

MeSH terms

  • Caspase 3 / genetics*
  • ErbB Receptors / genetics*
  • Interleukin-6 / genetics*
  • Molecular Docking Simulation
  • Non-alcoholic Fatty Liver Disease / drug therapy
  • Non-alcoholic Fatty Liver Disease / genetics*
  • Protein Interaction Maps
  • Proto-Oncogene Proteins c-akt / genetics*
  • Serum Albumin / genetics*

Substances

  • Interleukin-6
  • Serum Albumin
  • ErbB Receptors
  • Proto-Oncogene Proteins c-akt
  • Caspase 3