A Silent Exonic Mutation in a Rice Integrin-α FG-GAP Repeat-Containing Gene Causes Male-Sterility by Affecting mRNA Splicing

Int J Mol Sci. 2020 Mar 16;21(6):2018. doi: 10.3390/ijms21062018.

Abstract

Pollen development plays crucial roles in the life cycle of higher plants. Here we characterized a rice mutant with complete male-sterile phenotype, pollen-less 1 (pl1). pl1 exhibited smaller anthers with arrested pollen development, absent Ubisch bodies, necrosis-like tapetal hypertrophy, and smooth anther cuticular surface. Molecular mapping revealed a synonymous mutation in the fourth exon of PL1 co-segregated with the mutant phenotype. This mutation disrupts the exon-intron splice junction in PL1, generating aberrant mRNA species and truncated proteins. PL1 is highly expressed in the tapetal cells of developing anther, and its protein is co-localized with plasma membrane (PM) and endoplasmic reticulum (ER) signal. PL1 encodes an integrin-α FG-GAP repeat-containing protein, which has seven β-sheets and putative Ca2+-binding motifs and is broadly conserved in terrestrial plants. Our findings therefore provide insights into both the role of integrin-α FG-GAP repeat-containing protein in rice male fertility and the influence of exonic mutation on intronic splice donor site selection.

Keywords: PL1; RNA splicing; anther; integrin-α FG-GAP repeat-containing protein; male sterility; pollen; rice (Oryza sativa L.).

MeSH terms

  • Exons*
  • Flowers / cytology
  • Gene Expression Regulation, Plant
  • Infertility / genetics*
  • Integrins / metabolism*
  • Mutation
  • Oryza / genetics*
  • Phenotype
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Pollen / genetics
  • Pollen / growth & development
  • Pollen / metabolism
  • RNA Splicing*
  • RNA, Messenger / metabolism*
  • Sequence Analysis
  • Silent Mutation*

Substances

  • Integrins
  • Plant Proteins
  • RNA, Messenger