The application of metagenomic next-generation sequencing in diagnosing Chlamydia psittaci pneumonia: a report of five cases

BMC Pulm Med. 2020 Mar 17;20(1):65. doi: 10.1186/s12890-020-1098-x.

Abstract

Background: Chlamydia psittaci pneumonia is a zoonotic infectious disease caused by Chlamydia psittaci. Diagnostic tools, including culture, serologic test and PCR-based methods, are available but prone to false negative results.

Case presentation: This report included five cases of Chlamydia psittaci pneumonia. Symptoms and signs common to all 5 cases included fever, coughing, generalized muscle ache, and most notably, inflammatory infiltration of the lungs upon chest CT and X-ray. Metagenomic next-generation sequencing (mNGS) revealed the presence of Chlamydia psittaci in biopsy lung tissue in 3 cases and bronchoalveolar lavage fluid in the remaining 2 cases. Three patients responded to doxycycline plus moxifloxacin; two patients responded to moxifloxacin alone.

Conclusions: mNGS could be used to diagnose Chlamydia psittaci pneumonia.

Keywords: Case report; Chlamydia psittaci; mNGS.

Publication types

  • Case Reports

MeSH terms

  • Aged
  • Aged, 80 and over
  • Bronchoalveolar Lavage Fluid / microbiology
  • Chlamydophila psittaci / genetics*
  • Chlamydophila psittaci / isolation & purification*
  • Female
  • High-Throughput Nucleotide Sequencing*
  • Humans
  • Male
  • Middle Aged
  • Pneumonia, Bacterial / diagnosis*
  • Pneumonia, Bacterial / physiopathology
  • Psittacosis / diagnosis*
  • Psittacosis / physiopathology
  • Tomography, X-Ray Computed