Antigenic Cartography: Overview and Current Developments

Methods Mol Biol. 2020:2123:61-68. doi: 10.1007/978-1-0716-0346-8_5.

Abstract

Antigenic cartography is a powerful method that allows for the calculation of antigenic distances between influenza viruses or sera and their positioning on a map, by quantifying raw data from hemagglutination inhibition assays. As a consequence, the antigenic drift of influenza viruses over time can be visualized in a straightforward manner. Antigenic cartography is not only useful in the research of influenza virus evolution but also in the surveillance of influenza viruses. Most importantly, antigenic cartography plays a very important role in vaccine updating decisions, since by calculating the antigenic distances between a vaccine strain and circulating strains, an informed decision can be made on whether the distances are large enough to warrant a vaccine update or not. Recent improvements in antigenic cartography calculations have significantly improved its accuracy.

Keywords: Antigenic cartography; Antigenic characterization; Antigenic distance; Hemagglutination inhibition; Influenza.

Publication types

  • Review

MeSH terms

  • Animals
  • Antigens, Viral / blood
  • Antigens, Viral / immunology*
  • Hemagglutination Inhibition Tests / methods*
  • Hemagglutination Inhibition Tests / trends*
  • Humans

Substances

  • Antigens, Viral