Evaluation of Antibiotic Resistance of Helicobacter pylori Strains Isolated in Bari, Southern Italy, in 2017-2018 by Phenotypic and Genotyping Methods

Microb Drug Resist. 2020 Aug;26(8):909-917. doi: 10.1089/mdr.2019.0262. Epub 2020 Feb 26.

Abstract

Objective: Helicobacter pylori antibiotic resistance is a constantly evolving process and local surveillance is warranted to guide clinicians in the choice of therapy. Materials and Methods: Antibiotic susceptibility testing was performed by E-test on 92 H. pylori strains, and resistance to clarithromycin and levofloxacin was also evaluated using a commercially available genotyping method. Results: In naïve patients the resistance to clarithromycin, levofloxacin, and metronidazole was 37.7%, 26.2%, and 16.4%, respectively, significantly lower than the percentage found in treated patients. Concomitant resistance to ≥2 antibiotics was also observed in naïve patients. The A2143G mutation of the 23S-rRNA gene was the most frequently detected, also in naïve patients. The highest minimum inhibitory concentration (MIC)50 value (256 mg/L) was associated with A2142 mutations in all the patients carrying them. For levofloxacin resistance a mutation in codon 87 was detected in 63.9% and in codon 91 in 36.1% of the H. pylori strains, without significant differences in the patients groups. A mutation in codon 87 was associated with the highest MIC50 value (32 mg/L). Conclusions: In our area, a high prevalence of H. pylori primary resistance was detected; these rates were higher in patients who had experienced failure of several courses of therapy. A better knowledge of the local epidemiology of resistance, and the genotypes responsible, will improve the H. pylori eradication rates.

Keywords: H. pylori clarithromycin resistance; H. pylori levofloxacin resistance; point mutations in H. pylori.

Publication types

  • Observational Study

MeSH terms

  • Adult
  • Aged
  • Anti-Bacterial Agents / pharmacology*
  • Clarithromycin / pharmacology
  • Drug Resistance, Bacterial / drug effects*
  • Drug Resistance, Bacterial / genetics*
  • Drug Resistance, Bacterial / physiology
  • Drug Therapy, Combination
  • Female
  • Genes, Bacterial
  • Genotyping Techniques
  • Helicobacter pylori / drug effects*
  • Helicobacter pylori / genetics*
  • Humans
  • Italy
  • Levofloxacin / pharmacology
  • Male
  • Metronidazole / pharmacology
  • Microbial Sensitivity Tests
  • Middle Aged
  • Phenotype
  • Point Mutation
  • RNA, Ribosomal, 23S / genetics
  • Young Adult

Substances

  • Anti-Bacterial Agents
  • RNA, Ribosomal, 23S
  • Metronidazole
  • Levofloxacin
  • Clarithromycin