Unraveling virus relationships by structure-based phylogenetic classification

Virus Evol. 2020 Feb 12;6(1):veaa003. doi: 10.1093/ve/veaa003. eCollection 2020 Jan.

Abstract

Delineation of the intricacies of protein function from macromolecular structure constitutes a continual obstacle in the study of cell and pathogen biology. Structure-based phylogenetic analysis has emerged as a powerful tool for addressing this challenge, allowing the detection and quantification of conserved architectural properties between proteins, including those with low or no detectable sequence homology. With a focus on viral protein structure, we highlight how a number of investigations have utilized this powerful method to infer common functionality and ancestry.

Keywords: evolution; function; protein; structure; virus.

Publication types

  • Review