Human Ebp1 rescues the synthetic lethal growth of fission yeast cells lacking Cdb4 and Nup184

Genes Cells. 2020 Apr;25(4):288-295. doi: 10.1111/gtc.12757. Epub 2020 Mar 1.

Abstract

Cdb4 is a protein with unknown functions that binds to curved DNA in vitro in the fission yeast Schizosaccharomyces pombe. Homologues of Cdb4 were identified in a wide range of eukaryotes, including human Ebp1. Both S. pombe Cdb4 and human Ebp1 are nonpeptidase members of the methionine aminopeptidase family. It has been reported that Ebp1 homologues are involved in cell growth regulation and differentiation. However, opposing functions have also been considered and debated upon, and the precise biological functions of this conserved protein are largely unknown. S. pombe cdb4 is a nonessential gene, and no obvious phenotypes have been detected in cells with cdb4 gene deletion. In this study, we identified nup184, encoding a component of the nuclear pore complex, as a gene responsible for the synthetic lethal phenotype associated with cdb4. Furthermore, the synthetic lethal phenotype of Cdb4 was suppressed by over-expression of human Ebp1, suggesting that it has conserved crucial functions in S. pombe Cdb4 and human Ebp1. This synthetic lethal phenotype associated with Cdb4 and Nup184 provides a molecular genetics tool to study the functions of S. pombe Cdb4 and its conserved members of proteins, including human Ebp1.

Keywords: Schizosaccharomyces pombe; Cdb4; Ebp1; Nup184; PA2G4; fission yeast; human; methionine aminopeptidase.

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics
  • Adaptor Proteins, Signal Transducing / metabolism*
  • DNA-Binding Proteins / deficiency
  • HeLa Cells
  • Humans
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Schizosaccharomyces / cytology
  • Schizosaccharomyces / metabolism*
  • Schizosaccharomyces pombe Proteins / genetics*
  • Synthetic Lethal Mutations

Substances

  • Adaptor Proteins, Signal Transducing
  • CDB4 protein, S pombe
  • DNA-Binding Proteins
  • PA2G4 protein, human
  • RNA-Binding Proteins
  • Schizosaccharomyces pombe Proteins

Associated data

  • GENBANK/NP_593397.1
  • GENBANK/XP_011393840.1
  • GENBANK/XP_680568.1
  • GENBANK/NP_001190060.1
  • GENBANK/XP_020398166.1
  • GENBANK/AAV36985.2
  • GENBANK/NP_001002070.1
  • GENBANK/NP_001085830.1
  • GENBANK/NP_006182.2
  • GENBANK/XP_015155794.1
  • GENBANK/SPBC3E7.10
  • GENBANK/NP_055958.2
  • GENBANK/NP_595906.1
  • GENBANK/NP_006829.1