Small-molecule G-quadruplex stabilizers reveal a novel pathway of autophagy regulation in neurons

Elife. 2020 Feb 11:9:e52283. doi: 10.7554/eLife.52283.

Abstract

Guanine-rich DNA sequences can fold into four-stranded G-quadruplex (G4-DNA) structures. G4-DNA regulates replication and transcription, at least in cancer cells. Here, we demonstrate that, in neurons, pharmacologically stabilizing G4-DNA with G4 ligands strongly downregulates the Atg7 gene. Atg7 is a critical gene for the initiation of autophagy that exhibits decreased transcription with aging. Using an in vitro assay, we show that a putative G-quadruplex-forming sequence (PQFS) in the first intron of the Atg7 gene folds into a G4. An antibody specific to G4-DNA and the G4-DNA-binding protein PC4 bind to the Atg7 PQFS. Mice treated with a G4 stabilizer develop memory deficits. Brain samples from aged mice contain G4-DNA structures that are absent in brain samples from young mice. Overexpressing the G4-DNA helicase Pif1 in neurons exposed to the G4 stabilizer improves phenotypes associated with G4-DNA stabilization. Our findings indicate that G4-DNA is a novel pathway for regulating autophagy in neurons.

Keywords: G-quadruplex; aging; autophagy; cell biology; mouse; neurodegeneration; neurons; neuroscience; rat.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aminoquinolines
  • Animals
  • Autophagy*
  • Autophagy-Related Protein 7 / physiology*
  • Brain / metabolism
  • DNA Helicases / metabolism
  • G-Quadruplexes*
  • Humans
  • Memory Disorders
  • Mice
  • Neurons / physiology*
  • Picolinic Acids
  • Primary Cell Culture
  • Rats

Substances

  • Aminoquinolines
  • Picolinic Acids
  • pyridostatin
  • DNA Helicases
  • Autophagy-Related Protein 7