Comprehensive Analysis for Identifying Diagnostic and Prognostic Biomarkers in Colon Adenocarcinoma

DNA Cell Biol. 2020 Apr;39(4):599-614. doi: 10.1089/dna.2019.5215. Epub 2020 Feb 7.

Abstract

Colon adenocarcinoma (COAD) is a common noncutaneous carcinoma worldwide with high morbidity and mortality. Effective prevention methods are far from being met. Both diagnostic and prognostic models that can precisely and accurately predict the status and survival time of COAD are urgently needed. In the field of COAD, there have been limited studies on molecular biomarkers that can predict disease status and prognosis. Hence, an important task is to identify these biomarkers. We aimed to identify important risk genes that have the ability not only to diagnose tumors but also to predict overall survival. A comprehensive analysis was performed in this study. Finally, carbonic anhydrase 1 (CA1) and CA4 were identified as potential biomarkers due to their predictive roles in diagnosis and prognosis, and the results were further confirmed by a series of analyses. Overall, these findings are of great importance and may facilitate individualized treatment in diagnosis and prognosis.

Keywords: biomarkers; colon adenocarcinoma; diagnosis; prognosis; weighted gene coexpression network analysis.

MeSH terms

  • Adenocarcinoma / diagnosis
  • Adenocarcinoma / genetics*
  • Adenocarcinoma / pathology
  • Adult
  • Aged
  • Biomarkers, Tumor / genetics*
  • Carbonic Anhydrase I / genetics*
  • Carbonic Anhydrase IV / genetics*
  • Colon / pathology
  • Colonic Neoplasms / diagnosis
  • Colonic Neoplasms / genetics*
  • Colonic Neoplasms / pathology
  • Gene Expression Regulation, Neoplastic / genetics
  • Humans
  • Prognosis

Substances

  • Biomarkers, Tumor
  • Carbonic Anhydrase I
  • Carbonic Anhydrase IV
  • CA1 carbonic anhydrase, human
  • CA4 protein, human