MTHFR, TYMS and SLCO1B1 polymorphisms and adverse liver effects of methotrexate in rheumatoid arthritis

Pharmacogenomics. 2020 Apr;21(5):337-346. doi: 10.2217/pgs-2019-0186. Epub 2020 Feb 6.

Abstract

Aims: To investigate whether variants of MTHFR, TYMS and SLCO1B1 are associated with ALT elevation in rheumatoid arthritis patients starting methotrexate (MTX). Patients & methods: Clinical and laboratory data were collected from the start of MTX treatment. Genotyping of MTHFR, TYMS and SLCO1B1 was performed. Univariate and multiple logistic regression were used for statistical analysis. Results: 34 out of 369 patients experienced ALT >1.5 × ULN less than 6 months from start. MTHFR A1298C (rs1801131) was nominally associated with an ALT >1.5 × ULN within 6 months after the start of MTX (OR = 1.7 [95% CI: 1.04-2.9]; p = 0.03), but did not pass correction for multiple testing. A multiple model containing MTHFR 1298C and clinical factors predicted the outcome (C-statistic 0.735). TYMS and SLCO1B1 were not associated with the outcome. Conclusions: A model containing MTHFR 1298C and clinical factors might predict risk of early ALT elevation.

Keywords: MTHFR; TYMS and SLCO1B1; liver toxicity; methotrexate; rheumatoid arthritis; transaminases.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antirheumatic Agents / adverse effects*
  • Antirheumatic Agents / therapeutic use
  • Arthritis, Rheumatoid / drug therapy*
  • Arthritis, Rheumatoid / genetics
  • Female
  • Genotype
  • Humans
  • Liver / drug effects*
  • Liver / metabolism
  • Liver Function Tests
  • Liver-Specific Organic Anion Transporter 1 / genetics*
  • Logistic Models
  • Male
  • Methotrexate / adverse effects*
  • Methotrexate / therapeutic use
  • Methylenetetrahydrofolate Reductase (NADPH2) / genetics*
  • Middle Aged
  • Polymorphism, Single Nucleotide*
  • Thymidylate Synthase / genetics*

Substances

  • Antirheumatic Agents
  • Liver-Specific Organic Anion Transporter 1
  • SLCO1B1 protein, human
  • MTHFR protein, human
  • Methylenetetrahydrofolate Reductase (NADPH2)
  • TYMS protein, human
  • Thymidylate Synthase
  • Methotrexate