Purification of supercoiled p53-encoding plasmid using an arginine-modified macroporous support

J Chromatogr A. 2020 May 10:1618:460890. doi: 10.1016/j.chroma.2020.460890. Epub 2020 Jan 15.

Abstract

p53 is a tumour suppressor gene that has been explored for cancer gene therapy as a possible alternative to the common treatments. The use of plasmid DNA (pDNA) to carry the therapeutic gene has been considered, but it is requisite to preserve its supercoiled (sc) structure, for eliciting a more effective gene expression and therapeutic action. The purification of the sc pDNA using amino acids-based affinity chromatography has been successfully applied, exploring different amino acids and supports. From these studies, it stood out the selectivity of arginine for the recognition of sc pDNA. However, some limitation on the binding capacity was found in the arginine-agarose support, and in the case of monoliths, some fouling and clogging can limit sequential runs. By using macroporous support modified with arginine it was expected to take advantage of the selectivity of the ligand combined with the flow properties and binding capacity offered by the support. The arginine-modified macroporous support was characterized by SEM, EDX and FTIR also to verify the correct immobilization of arginine, and then used for pDNA purification. The support showed to be effective on the sc p53-pDNA isolation, and the robustness was also achieved by accomplishing the purification of plasmids with different sizes, only by slightly adjusting the experimental conditions. Regarding the dynamic binding capacity of the arginine-modified macroporous support, it was achieved an improvement of more than 50% in the pDNA binding capacity when compared with their homologous arginine-agarose commercial matrix, suggesting potential economic feasibility in case of scale-up.

Keywords: Affinity chromatography; Arginine; Biorecognition; Macroporous beads; Supercoiled isoform; p53-encoding plasmid.

MeSH terms

  • Arginine / chemistry*
  • Chemistry Techniques, Analytical / methods*
  • Chromatography, Affinity*
  • DNA, Superhelical / isolation & purification*
  • Plasmids / isolation & purification*
  • Sepharose / chemistry
  • Tumor Suppressor Protein p53 / genetics*

Substances

  • DNA, Superhelical
  • Tumor Suppressor Protein p53
  • Sepharose
  • Arginine