Caenorhabditis elegans phosphatase complexes in UniProtKB and Complex Portal

FEBS J. 2020 Jul;287(13):2664-2684. doi: 10.1111/febs.15213. Epub 2020 Feb 3.

Abstract

Phosphatases play an essential role in the regulation of protein phosphorylation. Less abundant than kinases, many phosphatases are components of one or more macromolecular complexes with different substrate specificities and specific functionalities. The expert scientific curation of phosphatase complexes for the UniProt and Complex Portal databases supports the whole scientific community by collating and organising small- and large-scale experimental data from the scientific literature into context-specific central resources, where the data can be freely accessed and used to further academic and translational research. In this review, we discuss how the diverse biological functions of phosphatase complexes are presented in UniProt and the Complex Portal, and how understanding the biological significance of phosphatase complexes in Caenorhabditis elegans offers insight into the mechanisms of substrate diversity in a variety of cellular and molecular processes.

Keywords: Complex Portal; UniProtKB; curation; phosphatase complex; protein database.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Caenorhabditis elegans / metabolism*
  • Caenorhabditis elegans Proteins / chemistry
  • Caenorhabditis elegans Proteins / metabolism*
  • Databases, Protein / standards*
  • Multiprotein Complexes / chemistry
  • Multiprotein Complexes / metabolism*
  • Phosphoric Monoester Hydrolases / chemistry
  • Phosphoric Monoester Hydrolases / metabolism*
  • Phosphorylation
  • Protein Processing, Post-Translational*
  • Substrate Specificity

Substances

  • Caenorhabditis elegans Proteins
  • Multiprotein Complexes
  • Phosphoric Monoester Hydrolases