Identification of circRNA-miRNA networks for exploring an underlying prognosis strategy for breast cancer

Epigenomics. 2020 Jan;12(2):101-125. doi: 10.2217/epi-2019-0058. Epub 2020 Jan 10.

Abstract

Aim: Circular RNAs (circRNAs) still have many potential functions in the process of tumor development that are not completely understood. The study aims to explore novel circRNAs and their mechanisms of action in breast cancer (BCa). Materials & methods: A combination strategy of RNA-sequencing (RNA-seq) technique, quantitative real-time PCR and bioinformatic analysis was employed to identify the potential mechanisms involving differentially expressed circRNAs in the serum exosomes and tissues of BCa patients. Results: The expression levels of hsa-circRNA-0005795 and hsa-circRNA-0088088 were significantly different both in serum exosomes and tissues and might function as competing endogenous RNAs and play vital roles in BCa development. Conclusion: We constructed two circRNA-miRNA networks and provided new insight into the prognosis and therapy of BCa using circRNAs from serum exosomes.

Keywords: breast cancer; ceRNA; circRNAs; exosomes; miRNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Breast Neoplasms / genetics*
  • Breast Neoplasms / metabolism
  • Cell Line, Tumor
  • Exosomes / genetics
  • Female
  • Gene Expression Regulation, Neoplastic*
  • Gene Ontology
  • Humans
  • MicroRNAs / metabolism*
  • Prognosis
  • RNA, Circular / metabolism*
  • RNA-Seq

Substances

  • MicroRNAs
  • RNA, Circular