Nucleolar control by a non-apoptotic p53-caspases-deubiquitinylase axis promotes resistance to bacterial infection

FASEB J. 2020 Jan;34(1):1107-1121. doi: 10.1096/fj.201901959R. Epub 2019 Nov 29.

Abstract

The nucleolus is best known for its cellular role in regulating ribosome production and growth. More recently, an unanticipated role for the nucleolus in innate immunity has recently emerged whereby downregulation of fibrillarin and nucleolar contraction confers pathogen resistance across taxa. The mechanism of this downregulation, however, remains obscure. Here we report that rather than fibrillarin itself being the proximal factor in this pathway, the key player is a fibrillarin-stabilizing deubiquitinylase USP-33. This was discovered by a candidate-gene search of Caenorhabditis elegans in which CED-3 caspase was revealed to execute targeted cleavage of USP-33, thus destabilizing fibrillarin. We also showed that cep-1 and ced-3 mutant worms altered nucleolar size and decreased antimicrobial peptide gene, spp-1, expression rendering susceptibility to bacterial infection. These phenotypes were reversed by usp-33 knockdown, thus linking the CEP-1-CED-3-USP-33 pathway with nucleolar control and resistance to bacterial infection in worms. Parallel experiments with the human analogs of caspases and USP36 revealed similar roles in coordinating these two processes. In summary, our work outlined a conserved cascade that connects cell death signaling to nucleolar control and innate immune response.

Keywords: bacterial resistance; caspases; deubiquitinylase; fibrillarin; nucleolus; p53.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis
  • Bacterial Infections / metabolism*
  • Caenorhabditis elegans / metabolism
  • Caenorhabditis elegans / microbiology*
  • Caenorhabditis elegans Proteins / metabolism
  • Cell Nucleolus / metabolism*
  • Chromosomal Proteins, Non-Histone / metabolism
  • Deubiquitinating Enzymes / metabolism*
  • HeLa Cells
  • Humans
  • Microscopy, Fluorescence
  • Pseudomonas Infections
  • RNA Interference
  • Staphylococcal Infections
  • Staurosporine / pharmacology
  • Tumor Suppressor Protein p53 / metabolism*
  • Ubiquitin / metabolism*
  • Ubiquitin Thiolesterase / metabolism

Substances

  • Caenorhabditis elegans Proteins
  • Chromosomal Proteins, Non-Histone
  • Tumor Suppressor Protein p53
  • USP36 protein, human
  • Ubiquitin
  • fibrillarin
  • Deubiquitinating Enzymes
  • USP33 protein, human
  • Ubiquitin Thiolesterase
  • Staurosporine