Comparison of sulfide-oxidizing Sulfurimonas strains reveals a new mode of thiosulfate formation in subsurface environments

Environ Microbiol. 2020 May;22(5):1784-1800. doi: 10.1111/1462-2920.14894. Epub 2020 Jan 2.

Abstract

Sulfur-oxidizing Sulfurimonas spp. are widespread in sediments, hydrothermal vent fields, aquifers and subsurface environments such as oil reservoirs where they play an important role in the sulfur cycle. We determined the genome sequence of the oil field isolate Sulfurimonas sp. strain CVO and compared its gene expression during nitrate-dependent sulfide oxidation to the coastal sediment isolate Sulfurimonas denitrificans. Formation of elemental sulfur (S0 ) and high expression of sulfide quinone oxidoreductase (SQR) genes indicates that sulfide oxidation in both strains is mediated by SQR. Subsequent oxidation of S0 was achieved by the sulfur oxidation enzyme complex (SOX). In the coastal S. denitrificans, the genes are arranged and expressed as two clusters: soxXY1 Z1 AB and soxCDY2 Z2 H, and sulfate was the sole metabolic end product. By contrast, the oil field strain CVO has only the soxCDY2 Z2 H cluster and not soxXY1 Z1 AB. Despite the absence of the soxXY1 Z1 AB cluster, strain CVO oxidized S0 to thiosulfate and sulfate, demonstrating that soxCDY2 Z2 H genes alone are sufficient for S0 oxidation in Sulfurimonas spp. and that thiosulfate is an additional metabolic end product. Screening of publicly available metagenomes revealed that Sulfurimonas spp. with only the soxCDY2 Z2 H cluster are widespread suggesting this mechanism of thiosulfate formation is environmentally significant.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Helicobacteraceae / isolation & purification
  • Helicobacteraceae / metabolism*
  • Nitrates / metabolism
  • Oil and Gas Fields / microbiology
  • Oxidation-Reduction
  • Quinone Reductases / genetics
  • Quinone Reductases / metabolism*
  • Sulfates / metabolism
  • Sulfides / metabolism
  • Sulfur / metabolism
  • Thiosulfates / metabolism*

Substances

  • Nitrates
  • Sulfates
  • Sulfides
  • Thiosulfates
  • Sulfur
  • Quinone Reductases
  • sulfide quinone reductase

Supplementary concepts

  • Sulfurimonas denitrificans