A new antiviral scaffold for human norovirus identified with computer-aided approaches on the viral polymerase

Sci Rep. 2019 Dec 5;9(1):18413. doi: 10.1038/s41598-019-54903-7.

Abstract

Human norovirus is the leading cause of acute gastroenteritis worldwide, affecting every year 685 million people. In about one third of cases, this virus affects children under five years of age, causing each year up to 200,000 child deaths, mainly in the developing countries. Norovirus outbreaks are associated with very significant economic losses, with an estimated societal cost of 60 billion dollars per year. Despite the marked socio-economic consequences associated, no therapeutic options or vaccines are currently available to treat or prevent this infection. One promising target to identify new antiviral agents for norovirus is the viral polymerase, which has a pivotal role for the viral replication and lacks closely homologous structures in the host. Starting from the scaffold of a novel class of norovirus polymerase inhibitors recently discovered in our research group with a computer-aided method, different new chemical modifications were designed and carried out, with the aim to identify improved agents effective against norovirus replication in cell-based assays. While different new inhibitors of the viral polymerase were found, a further computer-aided ligand optimisation approach led to the identification of a new antiviral scaffold for norovirus, which inhibits human norovirus replication at low-micromolar concentrations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antiviral Agents / chemical synthesis*
  • Antiviral Agents / pharmacology
  • Binding Sites
  • Drug Design
  • Enzyme Inhibitors / chemical synthesis
  • Enzyme Inhibitors / pharmacology
  • Gene Expression
  • Humans
  • Mice
  • Molecular Docking Simulation
  • Norovirus / drug effects*
  • Norovirus / enzymology
  • Norovirus / genetics
  • Norovirus / growth & development
  • Oxazoles / chemical synthesis*
  • Oxazoles / pharmacology
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Protein Structure, Secondary
  • Pyrimidines / chemical synthesis*
  • Pyrimidines / pharmacology
  • RAW 264.7 Cells
  • RNA-Dependent RNA Polymerase / antagonists & inhibitors*
  • RNA-Dependent RNA Polymerase / chemistry
  • RNA-Dependent RNA Polymerase / metabolism
  • Structure-Activity Relationship
  • Substrate Specificity
  • Sulfonamides / chemical synthesis*
  • Sulfonamides / pharmacology
  • Thiophenes / chemical synthesis*
  • Thiophenes / pharmacology
  • Viral Proteins / antagonists & inhibitors*
  • Viral Proteins / chemistry
  • Viral Proteins / metabolism
  • Virus Replication / drug effects

Substances

  • Antiviral Agents
  • Enzyme Inhibitors
  • Oxazoles
  • Pyrimidines
  • Sulfonamides
  • Thiophenes
  • Viral Proteins
  • RNA-Dependent RNA Polymerase