The effect of inhibition on rate code efficiency indicators

PLoS Comput Biol. 2019 Dec 2;15(12):e1007545. doi: 10.1371/journal.pcbi.1007545. eCollection 2019 Dec.

Abstract

In this paper we investigate the rate coding capabilities of neurons whose input signal are alterations of the base state of balanced inhibitory and excitatory synaptic currents. We consider different regimes of excitation-inhibition relationship and an established conductance-based leaky integrator model with adaptive threshold and parameter sets recreating biologically relevant spiking regimes. We find that given mean post-synaptic firing rate, counter-intuitively, increased ratio of inhibition to excitation generally leads to higher signal to noise ratio (SNR). On the other hand, the inhibitory input significantly reduces the dynamic coding range of the neuron. We quantify the joint effect of SNR and dynamic coding range by computing the metabolic efficiency-the maximal amount of information per one ATP molecule expended (in bits/ATP). Moreover, by calculating the metabolic efficiency we are able to predict the shapes of the post-synaptic firing rate histograms that may be tested on experimental data. Likewise, optimal stimulus input distributions are predicted, however, we show that the optimum can essentially be reached with a broad range of input distributions. Finally, we examine which parameters of the used neuronal model are the most important for the metabolically efficient information transfer.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Action Potentials / physiology
  • Adenosine Triphosphate / metabolism
  • Animals
  • Computational Biology
  • Computer Simulation
  • Excitatory Postsynaptic Potentials / physiology
  • Membrane Potentials / physiology
  • Models, Neurological*
  • Neural Conduction / physiology
  • Neural Inhibition / physiology
  • Neurons / physiology*
  • Signal-To-Noise Ratio
  • Synaptic Transmission / physiology

Substances

  • Adenosine Triphosphate

Grants and funding

This work was supported by the Institute of Physiology RVO:67985823 and by the Czech Science Foundation project 17-06943S. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.