Golgi-localized cyclophilin 21 proteins negatively regulate ABA signalling via the peptidyl prolyl isomerase activity during early seedling development

Plant Mol Biol. 2020 Jan;102(1-2):19-38. doi: 10.1007/s11103-019-00928-5. Epub 2019 Nov 30.

Abstract

Plant possesses particular Golgi-resident cyclophilin 21 proteins (CYP21s) and the catalytic isomerase activities have a negative effect on ABA signalling gene expression during early seedling development. Cyclophilins (CYPs) are essential for diverse cellular process, as these catalyse a rate-limiting step in protein folding. Although Golgi proteomics in Arabidopsis thaliana suggests the existence of several CYPs in the Golgi apparatus, only one putative Golgi-resident CYP protein has been reported in rice (Oryza sativa L.; OsCYP21-4). Here, we identified the Golgi-resident CYP21 family genes and analysed their molecular characteristics in Arabidopsis and rice. The CYP family genes (CYP21-1, CYP21-2, CYP21-3, and CYP21-4) are plant-specific, and their appearance and copy numbers differ among plant species. CYP21-1 and CYP21-4 are common to all angiosperms, whereas CYP21-2 and CYP21-3 evolved in the Malvidae subclass. Furthermore, all CYP21 proteins localize to cis-Golgi, trans-Golgi or both cis- and trans-Golgi membranes in plant cells. Additionally, based on the structure, enzymatic function, and topological orientation in Golgi membranes, CYP21 proteins are divided into two groups. Genetic analysis revealed that Group I proteins (CYP21-1 and CYP21-2) exhibit peptidyl prolyl cis-trans isomerase (PPIase) activity and regulate seed germination and seedling growth and development by affecting the expression levels of abscisic acid signalling genes. Thus, we identified the Golgi-resident CYPs and demonstrated that their PPIase activities are required for early seedling growth and development in higher plants.

Keywords: ABA signalling; Cyclophilin 21 proteins; Golgi apparatus; Peptidyl prolyl isomerase; Seed germination; Seedling development.

MeSH terms

  • Arabidopsis / genetics
  • Arabidopsis / metabolism
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism
  • Cyclophilins / classification
  • Cyclophilins / genetics*
  • Cyclophilins / metabolism*
  • Gene Expression Regulation, Plant
  • Gene Knockdown Techniques
  • Golgi Apparatus / metabolism*
  • Oryza / genetics
  • Oryza / metabolism
  • Peptidylprolyl Isomerase / metabolism
  • Phylogeny
  • Plant Development* / genetics
  • Plant Development* / physiology
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • Proteomics
  • Seedlings / metabolism*
  • Signal Transduction*

Substances

  • Arabidopsis Proteins
  • Plant Proteins
  • Cyclophilins
  • Peptidylprolyl Isomerase