The binding of precipitant ions in the tetragonal crystals of hen egg white lysozyme

J Biomol Struct Dyn. 2020 Oct;38(17):5159-5172. doi: 10.1080/07391102.2019.1696706. Epub 2019 Dec 6.

Abstract

The bonds between lysozyme molecules and precipitant ions in single crystals grown with chlorides of several metals are analysed on the basis of crystal structure data. Crystals of tetragonal hen egg lysozyme (HEWL) were grown with chlorides of several alkali and transition metals (LiCl, NaCl, KCl, NiCl2 and CuCl2) as precipitants and the three-dimensional structures were determined at 1.35 Å resolution by X-ray diffraction method. The positions of metal and chloride ions attached to the protein were located, divided into three groups and analysed. Some of them, in accordance with the recently proposed and experimentally confirmed crystal growth model, provide connections in protein dimers and octamers that are precursor clusters in the crystallization lysozyme solution. The first group, including Cu+2, Ni+2 and Na+1 cations, binds specifically to the protein molecule. The second group consists of metal and chloride ions bound inside the dimers and octamers. The third group of ions can participate in connections between the octamers that are suggested as building units during the crystal growth. The arrangement of chloride and metal ions associated with lysozyme molecule at all stages of the crystallization solution formation and crystal growth is discussed.Communicated by Ramaswamy H. Sarma.

Keywords: Lysozyme; X-ray structure; crystal growth; metal cations.

MeSH terms

  • Animals
  • Chickens
  • Crystallography, X-Ray
  • Egg White*
  • Muramidase*
  • Protein Conformation

Substances

  • hen egg lysozyme
  • Muramidase