Molecular insight on the altered membrane trafficking of TrkA kinase dead mutants

Biochim Biophys Acta Mol Cell Res. 2020 Feb;1867(2):118614. doi: 10.1016/j.bbamcr.2019.118614. Epub 2019 Nov 21.

Abstract

We address the contribution of kinase domain structure and catalytic activity to membrane trafficking of TrkA receptor tyrosine kinase. We conduct a systematic comparison between TrkA-wt, an ATP-binding defective mutant (TrkA-K544N) and other mutants displaying separate functional impairments of phosphorylation, ubiquitination, or recruitment of intracellular partners. We find that only K544N mutation endows TrkA with restricted membrane mobility and a substantial increase of cell surface pool already in the absence of ligand stimulation. This mutation is predicted to drive a structural destabilization of the αC helix in the N-lobe by molecular dynamics simulations, and enhances interactions with elements of the actin cytoskeleton. On the other hand, a different TrkA membrane immobilization is selectively observed after NGF stimulation, requires both phosphorylation and ubiquitination to occur, and is most probably related to the signaling abilities displayed by the wt but not mutated receptors. In conclusion, our results allow to distinguish two different TrkA membrane immobilization modes and demonstrate that not all kinase-inactive mutants display identical membrane trafficking.

Keywords: Membrane dynamics; Molecular dynamics; Mutation; TrkA receptor; Tyrosine kinase domain; VEGFR2 receptor.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actin Cytoskeleton / metabolism
  • Cell Line, Tumor
  • Cell Membrane / metabolism
  • Humans
  • Molecular Dynamics Simulation
  • Mutagenesis, Site-Directed
  • Nerve Growth Factor / pharmacology
  • Phosphorylation / drug effects
  • Protein Conformation, alpha-Helical
  • Protein Processing, Post-Translational
  • Protein Structure, Tertiary
  • Protein Transport
  • Receptor, trkA / chemistry
  • Receptor, trkA / genetics
  • Receptor, trkA / metabolism*
  • Ubiquitination / drug effects
  • Vascular Endothelial Growth Factor Receptor-2 / chemistry
  • Vascular Endothelial Growth Factor Receptor-2 / genetics
  • Vascular Endothelial Growth Factor Receptor-2 / metabolism

Substances

  • Nerve Growth Factor
  • Receptor, trkA
  • Vascular Endothelial Growth Factor Receptor-2